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Biomiga Mollusk RNA Kit - R6619-01

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Description :

Introduction

The EZgeneTM Mollusks RNA maxi Kit is designed for efficient recovery of total RNA greater than 200 nt from molluscs, roundworms, flatworms, and other invertebrate tissue samples rich in mucopolysaccharides. The procedure relies on the well established properties of the cationic detergent, cetyltrimethyl ammonium bromide (CTAB), in conjunction with the selective RNA binding of silica membrane. Samples are homogenized and lysed in a high salt buffer containing CTAB and extracted with chloroform to remove mucopolysaccharides and denature proteins. Following a rapid alcohol precipitation step, binding conditions are adjusted and RNA further purified using ezBind RNA spin columns. In this way salts, proteins and other contaminants are removed to yield high quality total RNA suitable for downstream applications such as reverse transcription, poly (A)+ mRNA selection, and hybridization techniques.

Storage and Stability

DNase I (optional) should be stored at -20°C. All other components can be stored at room temperature (22-25°C). All kit components are guaranteed for 1 year from the date of purchasing.

Kit Contents

Note:DNase I are not supplied. They could be purchased from Biomiga.

Catalog#

R6619-00

R6619-01

R6619-02

Preps

4

50

250

ezBind Columns

4

50

250

Collection Tubes

8

100

500

Buffer BML

2 ml

20 mL

100 mL

Buffer LY

4 mL

30 mL

130 mL

Buffer RB

4 mL

45 mL

220 mL

RNA Wash Buffer

2 mL

20 mL

54 mL

DEPC-Treated ddH2O

500 µL

20 mL

70 mL

DNase I Stop Buffer

400 µL

4.8 mL

24 mL

User Manual

1

1

1


 

Before Starting

Prepare all components and get all necessary materials ready by examining this instruction booklet and become familiar with each steps.

Important

  •  Determine amount of Buffer BML and Buffer LY to be used, add 20 µL β-mercaptoethanol (β-ME) per 1 mL Buffer BML or LY. Buffer BML and Buffer LY contains β-ME can be stored at room temperature for up to 1 month. β-ME is key in denaturing endogenous RNase.
  •  Add 8 mL (R6619-00) or 20 mL (R6619-01) or 216 mL (R6619-02) 100% ethanol to RNA Wash Buffer before use. The final concentration of 100% ethanol should be 80%.
  •  During shipment or storage under room temperature, crystal may form in certain buffers. Dissolve the precipitates at 37°C before use.
  •  Do not freeze the buffers at any time.
  •  Preheat the Buffer RB and DEPC-treated ddH2O (100 µL per sample) at 65°C.
  •  Optional: Add 600 µL (R6619-00) or 7.2 mL (R6619-01) or 36 mL (R6619-02) 100% ethanol to DNase Stop Buffer before use.
  •  Smaples: fresh tissue is preferred for RNA integrity.

Materials supplied by users

  •  Tabletop microcentrifuge.
  •  100% ethanol
  •  Nuclease-free microfuge tubes
  •  β-mercaptoethanol for denaturing the endogenous RNase.
  •  Chloroform and isoamyl alcohol (24:1) for removal of polysaccharides and proteins.
  •  Optional: DNase I 
     

 Trouble Shooting Guide

Problems

Possible reasons

Suggested Improvements

Low A260/A280 ratios

Protein contamination

Do a Phenol: Chloroform extraction. Loss of total RNA (up to 40%) should be expected.

Low A260/A280 ratios

Guanidine Thiocyanate contamination

Add 2.5 volumes of ethanol and 0.1M NaCl (final concentration) to precipitate RNA. Incubate for 30 min at -20 ℃. Centrifuge at 10,000 g for 15 min at 4°C Resuspend the RNA pellet in DEPC-treated water.

Low Yield

RNA in sample degraded

Freeze samples immediately in liquid nitrogen and store at -70°C after collect it.

Low yield

RNA remains in the column

Pre-heat DEPC-treated ddH2O and repeat elution.

Low Yield

The binding capacity of the membrane in the spin column was exceeded

Use of too much tissue sample exceeding the binding capacity of spin column will cause the decreasing of total RNA yield.

Low Yield

Ethanol not added to buffer

Add ethanol to the RNA Wash Buffer and DNase Stop Solution before purification.

Genomic DNA contamination

Too much total RNA sample was used in RT-PCR.

Reduce total RNA amount used in RT-PCR to 50-100 ng.

Genomic DNA contamination

The sample may contain too much genomic DNA.

Reduce the amount of starting tissue in the preparation of the homogenate. Most tissues will not show a genomic DNA contamination problem at 30 mg or less per prep.

Increase buffer volume and do multiple loadings to column.

Operating Protocol :


  • Model: R6619-01
  • Manufactured by: Biomiga

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